Bpp Phyl Bppsequencesimulator Class Reference
bpp-phyl: bpp::SequenceSimulator Class Reference
bpp-phyl: bpp::HomogeneousSequenceSimulator Class Reference
bpp-phyl: bpp::HomogeneousSequenceSimulator Class Reference
bpp-phyl: bpp::NonHomogeneousSequenceSimulator Class Reference
bpp-phyl3: bpp::SubstitutionProcessCollectionMember Class Reference
bpp-phyl3: bpp::DRTreeLikelihood Class Reference
bpp-phyl3: bpp::CodonReversibleSubstitutionModelInterface Class Reference
bpp-phyl: bpp::FrequenciesSet Class Reference
bpp-phyl3: bpp::SimProcessEdge Class Reference
bpp-phyl3: bpp::BppOTransitionModelFormat Class Reference
Advertisement Space (300x250)
bpp-phyl: bpp::MixedSubstitutionModelSet Class Reference
bpp-phyl: bpp::ReversibleSubstitutionModel Class Reference
bpp-phyl: bpp::TreeTemplate Class Template Reference
bpp-phyl: bpp::GCFrequenciesSet Class Reference
bpp-phyl: bpp::FullNucleotideFrequenciesSet Class Reference
bpp-phyl3: bpp::WrappedSubstitutionModel Class Reference
bpp-phyl: bpp::CodonDistanceSubstitutionModel Class Reference
bpp-phyl: bpp::NaiveSubstitutionCount Class Reference
bpp-phyl: bpp::MixtureOfASubstitutionModel Class Reference
bpp-phyl: bpp::MarkovModulatedFrequenciesSet Class Reference
Advertisement Space (336x280)
bpp-phyl: bpp::MixtureOfASubstitutionModel Class Reference
bpp-phyl: bpp::ProbabilisticRewardMapping Class Reference
bpp-phyl3: bpp::WrappedTransitionModel Class Reference
bpp-phyl: bpp::CodonRateSubstitutionModel Class Reference
bpp-phyl3: bpp::LikelihoodCalculationSingleProcess Class Reference
bpp-phyl: bpp::CanonicalStateMap Class Reference
bpp-phyl: bpp::ReversibleSubstitutionModel Class Reference
bpp-phyl: bpp::SubstitutionModel Class Reference
bpp-phyl: bpp::FullNucleotideFrequenciesSet Class Reference
bpp-phyl: bpp::AbstractMixedSubstitutionModel Class Reference
Advertisement Space (336x280)
bpp-phyl: bpp::SubstitutionCount Class Reference
bpp-phyl: bpp::TwoTreeLikelihood Class Reference
bpp-phyl: bpp::YpR_Gen Class Reference
bpp-phyl: bpp::DRNonHomogeneousTreeLikelihood Class Reference
bpp-phyl: bpp::RHomogeneousTreeLikelihood Class Reference
bpp-phyl3: bpp::WrappedSubstitutionModel Class Reference