Bpp Phyl3 Bppsimprocessedge Class Reference
bpp-phyl3: bpp::SubstitutionProcessCollectionMember Class Reference
bpp-phyl3: bpp::DRTreeLikelihood Class Reference
bpp-phyl: bpp::SequenceSimulator Class Reference
bpp-phyl3: bpp::AbstractIMultiPhyloTree Class Reference
bpp-phyl3: bpp::GTR Class Reference
bpp-phyl3: bpp::WrappedTransitionModel Class Reference
bpp-phyl3: bpp::DRTreeLikelihood Class Reference
bpp-phyl3: bpp::BppOTransitionModelFormat Class Reference
bpp-phyl3: bpp::SubstitutionProcessCollectionMember Class Reference
bpp-phyl3: bpp::WrappedSubstitutionModel Class Reference
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bpp-phyl: bpp::FullNucleotideFrequenciesSet Class Reference
bpp-phyl3: bpp::GTR Class Reference
bpp-phyl3: bpp::MixedTransitionModelInterface Class Reference
bpp-phyl3: bpp::OneProcessSequencePhyloLikelihood Class Reference
bpp-phyl: bpp::ProbabilisticRewardMapping Class Reference
bpp-phyl: bpp::MixtureOfASubstitutionModel Class Reference
bpp-phyl: bpp::MarkovModulatedFrequenciesSet Class Reference
bpp-phyl3: bpp::LikelihoodCalculationSingleProcess Class Reference
bpp-phyl: bpp::TreeTemplate Class Template Reference
bpp-phyl: bpp::DRNonHomogeneousTreeLikelihood Class Reference
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bpp-phyl: bpp::MixtureOfASubstitutionModel Class Reference
bpp-phyl: bpp::ProbabilisticRewardMapping Class Reference
bpp-phyl3: bpp::WrappedSubstitutionModel Class Reference
bpp-phyl3: bpp::MixtureOfASubstitutionModel Class Reference
bpp-phyl3: bpp::MixtureOfTransitionModels Class Reference
bpp-phyl3: bpp::OneChangeRegisterTransitionModel Class Reference
bpp-phyl3: bpp::MarkovModulatedSubstitutionModel Class Reference
bpp-phyl3: bpp::DRHomogeneousTreeLikelihood Class Reference
bpp-phyl: bpp::SubstitutionModel Class Reference
bpp-phyl3: bpp::BppOTransitionModelFormat Class Reference
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bpp-phyl: bpp::TwoTreeLikelihood Class Reference
bpp-phyl: bpp::AbstractMixedSubstitutionModel Class Reference
bpp-phyl3: bpp::MixtureOfTransitionModels Class Reference
bpp-phyl3: bpp::DRNonHomogeneousTreeLikelihood Class Reference
bpp-phyl3: bpp::DRNonHomogeneousTreeLikelihood Class Reference
bpp-phyl3: bpp::MixtureOfASubstitutionModel Class Reference